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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900251.1_cds_XP_016450314.1_44780
CDS Infomation

[gene=LOC107775142] [db_xref=GeneID:107775142] [protein=pre-mRNA-processing factor 19 homolog 1-like] [protein_id=XP_016450314.1] [location=complement(join(37954..38066,38163..38233,38518..38569,39073..39169,39278..39355,39458..39574,39683..39787,40604..40678,41249..41308,41412..41507,42360..42476,42675..42796,42882..43023,44928..45014,45574..45636,45757..45828,48059..48144,48272..48284))] [gbkey=CDS]
Sequence

ATGAACTGTTCAATTTCCGGCGAGGTGCCGGAGGATCCGGTGGTGTCGAAAAAGTCTGGA
CTCCTTTACGAGAAGCGTTTAATAGAAAGACACATCTCTGATTATGGTAAATGTCCTGTT
ACCGGAGAGCCATTGACGGCAGATGACATTATCCCTGTTAAAACTGGCAAGATAGTGAAA
CCCCGACCTGTACAGGCTGCTAGCATCCCTGGGATGTTGGGAATGTTTCAAATAGAATGG
GATGGTCTGATGCTGTCAAATTTTGCGTTGGAACAACAATTACATACTGCAAGGCAAGAG
CTGAGTCATGCTTTATATCAGCATGATGCTGCCTGCAGAGTAATTGCCAGGCTGAAAAAG
GAAAGGGATGAGGCAAGGGGGTTACTTGCCCAGGCCGAAAGACAAATACCCATGGCAGCC
ACTACAGCAGTTGGTGCTACTGCTTTAAGCAATGGGAAAAGAGCTGCCGAGGATGAGGAG
ATGGGTCCTGATGGCAAGAAAATTCGCCCTGGAATATCAAACTCTGTCATTGAGACTCTT
ACGGAATGTAATGCTGCTCTTTCACAACAAAGGAAAAAACGACAGATACCGGCAACACTG
GCCTCTGTGGATGCTCTGGAAAGATATACCCAACTGAATAGTTATCCTCTTCACAAAACC
AACAAACCTGGCATTTTGTCTTTGGATATTCATTATCCTAAGGACTTAATTGCTACTGGT
GGTGTTGATTCAAATGCTGTGGTCTTCGATCGTCCTTCAGGACAAATCATATCAACACTA
AGTGGTCATTCAAAGAGGGTTACCAGTGTAAAATTTGCGTCTGAGGGTGAACTAGTGGTC
TCTGGCTCAGCAGATAAGACAGTTCGTGTGTGGCAAAGTTCTGAAAATGGGAACTATGAC
TGTAGGCATGTCTTGAAAGATCATACAGCAGAGGTGCAAGCTGTCACTGTCCATGCGACC
AATAACTATTTTGTGACTGCTTCTCTTGATAGCACATGGTGCTTTTATGATCTTGCTTCT
GGCTTATGCCTTGCACAGGTGGCAGATGCTACAGAATCTGAGGGCTACACATCCGCAGCT
TTCCACCCTGATGGTCTGATCCTTGGAACAGGGACCTCAGGGTCTCTGGTTAAGATATGG
GATGTAAAAAGTCAGGCAAATGTTGCAAGATTTGATGGCCATGTTGGGTCTGTAACTGCT
ATTTCCTTTTCAGAAAATGGTTACTTCTTAGCAACTGCTGCTCATGATGGTGTTAAACTT
TGGGATTTACGCAAATTGAAGAATTTCCGAAATTTCTCTCTTTACGATGAAAATACACCG
ACTCAATCAGTGCAATTTGACCATAGTGGAAGTTATCTTGCCTTAGGAGGCTCAGATATA
CGAGTTTTCCAAGTCGCCAGTGTTAAGGCTGAATGGAATCACATCAAAACCCTCCCCGAC
TTATCAGGCACAGGTAAAGCAACATGTCTGAAATTTGGTCCAGATGCAAAATACATAGCT
GTCGGATCTATGGACCGTAATTTAAGAATATTTGGGCTGCCTGGCGAGGATCAAATGGAG
AGTTAG

Peptide Sequence

PEP ID

XP_016450314.1
PEP Infomation

PREDICTED: pre-mRNA-processing factor 19 homolog 1-like [Nicotiana tabacum]
Sequence

MNCSISGEVPEDPVVSKKSGLLYEKRLIERHISDYGKCPVTGEPLTADDIIPVKTGKIVK
PRPVQAASIPGMLGMFQIEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARGLLAQAERQIPMAATTAVGATALSNGKRAAEDEEMGPDGKKIRPGISNSVIETL
TECNAALSQQRKKRQIPATLASVDALERYTQLNSYPLHKTNKPGILSLDIHYPKDLIATG
GVDSNAVVFDRPSGQIISTLSGHSKRVTSVKFASEGELVVSGSADKTVRVWQSSENGNYD
CRHVLKDHTAEVQAVTVHATNNYFVTASLDSTWCFYDLASGLCLAQVADATESEGYTSAA
FHPDGLILGTGTSGSLVKIWDVKSQANVARFDGHVGSVTAISFSENGYFLATAAHDGVKL
WDLRKLKNFRNFSLYDENTPTQSVQFDHSGSYLALGGSDIRVFQVASVKAEWNHIKTLPD
LSGTGKATCLKFGPDAKYIAVGSMDRNLRIFGLPGEDQMES

Transcript Sequence

Gene sequence data has not been registered.